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International consortium
The Human Proteome Organization (HUPO) is an international consortium of national proteomics research associations, government researchers, academic institutions
Human_Proteome_Organization
Scientific project coordinated by the Human Proteome Organization
The Human Proteome Project (HPP) is a collaborative effort coordinated by the Human Proteome Organization. Its stated goal is to experimentally observe
Human_Proteome_Project
International scientific research project (1990–2003)
Project – Former research initiative Human proteome project – Scientific project coordinated by the Human Proteome OrganizationPages displaying short descriptions
Human_Genome_Project
Set of proteins that can be expressed by a genome, cell, tissue, or organism
the human proteome, including the Human Proteome Map Archived 2020-08-06 at the Wayback Machine, ProteomicsDB, isoform.io, and The Human Proteome Project
Proteome
Indian scientist
elected member of the Council of Human Proteome Organization. He is most noted for his contributions in the Human Proteome Project where he served as the
R._Sirdeshmukh
South korean biochemist
director of the Yonsei Proteome Research Center in Seoul, Korea. In 2009, he was chosen President of the Human Proteome Organization (HUPO). Paik grew up
Young-Ki_Paik
American genetics researcher
transcriptomes, proteomes, and other high-throughput omics datasets. His lab has contributed to understanding the genomes and transcriptomes of yeast and humans. The
Michael_P._Snyder
American doctor (born 1941)
founder of the international Human Proteome Organization (HUPO) in 2001, a member of the Council of HUPO's pilot Plasma Proteome Project from 2002 through
Gil_Omenn
Italian biologist and academic
Council Starting Grant 2016 EMBO Young Investigator Award 2016 Human Proteome Organization Robert J. Cotter Award 2017 Swiss Society for Molecular and Cellular
Paola_Picotti
Cardiac physiology scientist
the Human Proteome Organization. She is currently serving on the board of directors of U.S. Human Proteome Organization. 2021 U.S. Human Proteome Organization
Peipei_Ping
Evolutionary process
history, humans gradually developed traits such as bipedalism, dexterity, and complex language. Modern humans interbred with archaic humans, indicating
Human_evolution
interested Asian countries to be a focal hub in the Pacific for the Human Proteome Organization. The aims of the APS are to promote and facilitate proteomics
Australasian Proteomics Society
Australasian_Proteomics_Society
Proteogenomics research scientist
Chromosome-centric Human Proteome Project, and is the group lead of chromosome 4. Chen served as president for the Human Proteome Organization (2021-2022),
Yu-Ju_Chen
Sabine Becker 2002 Jasna Peter-Katalinic The major awards of the Human Proteome Organization are the Distinguished Achievement in Proteomic Sciences Award
List of women mass spectrometrists
List_of_women_mass_spectrometrists
International working group
Proteomics Standards Initiative (PSI) is a working group of the Human Proteome Organization. It aims to define data standards for proteomics to facilitate
Proteomics Standards Initiative
Proteomics_Standards_Initiative
American biotechnology company
the plasma proteome. Independent benchmark studies indicate that nanoparticle-based plasma proteomics workflows significantly enhance proteome depth and
Seer,_Inc.
DNA that does not code for proteins
GS (2021). "Reflections on the HUPO Human Proteome Project, the Flagship Project of the Human Proteome Organization, at 10 Years". Molecular & Cellular
Non-coding_DNA
American scientist
founding president of US-Human Proteome Organization (US HUPO), and senior vice president of international Human Proteome Organization. She serves as a member
Catherine_Clarke_Fenselau
Australian glycoscientist
Distinguished Achievement in Proteomic Sciences Award from the Human Proteome Organization. Her research focuses on biological functional of glycoconjugates
Nicki_Packer
Soviet-born Canadian scientist
and design of different MS instrumentation. 2019 HUPO Award (Human Proteome Organization) 2004 Elsevier / Spectrochimica Acta Atomic Spectroscopy Award
Vladimir_Baranov
Australasian Proteomics Society and a past treasurer of the Human Proteome Organization. Simpson was elected Honorary Member of the American Society
Richard_J._Simpson
Canadian scientist
Achievement Award in Plasma Spectrochemistry 2019 HUPO Award (Human Proteome Organization) 2014 Fellow of the American Institute for Medical and Biological
Scott_D._Tanner
Subfamily of viruses in the family Coronaviridae
LL, et al. (August 2003). "Unique and conserved features of genome and proteome of SARS-coronavirus, an early split-off from the coronavirus group 2 lineage"
Coronavirus
Scientist researching clinical proteomics
member-at-large and a council member of Human Proteome Organization, and the president of US Human Proteome Organization. She was a technical briefs editor
Jennifer_Van_Eyk
Biostatistician and computer scientist
serves as council member for the Human Proteome Organization, board of director for the US Human Proteome Organization, and president of the American Statistical
Olga_Vitek
Biochemist
the American Society for Mass Spectrometry (2002–2004), the Human Proteome Organization (2011–2012), and the International Mass Spectrometry Foundation
Catherine_E._Costello
American ophthalmologist
Mass Spectrometry. He also is a member of the Human Proteome Organization, and leads its Human Eye Proteome Project. He has been a featured speaker at national
Richard_David_Semba
Canadian cell biologist
board from 2000 to 2007. Bergeron is also past-president of the Human Proteome Organization (2004-2006) and is past-chair of its HUPO Initiatives project
John_J._M._Bergeron
American learned society
publishes other content such as "HUPO views" (reports from the Human Proteome Organization), proceedings from HUPO meetings, and the proceedings of the
American Society for Biochemistry and Molecular Biology
American_Society_for_Biochemistry_and_Molecular_Biology
Database of human proteins
academia and industry to freely access the data for exploration of the human proteome. In May 2026, version 25.1 was launched where Deep Visual Proteomics
Human_Protein_Atlas
Chinese-born Wisconsin professor
Distinguished Chair in Pharmaceutical Sciences. She serves on the US Human Proteome Organization Board of Directors, Chinese American Society for Mass Spectrometry
Lingjun_Li
Oncologist
Innovation Northwest Woman to Watch in Life Science Award 2015 Human Proteome Organization (HUPO) Distinguished Achievement in Proteomic Sciences Award
Amanda_Paulovich
Academic journal
other content such as "HUPO views", which are reports from the Human Proteome Organization (HUPO), proceedings from HUPO meetings, and the proceedings of
Molecular & Cellular Proteomics
Molecular_&_Cellular_Proteomics
Cancer cell biologist
2020. Rodland serves on the board of directors for the U.S. Human Proteome Organization, the editorial board of Cancer Biomarkers and Cancer Genomics
Karin_Rodland
Canadian scientist
imaging mass cytometry instruments and reagents. 2019 HUPO Award (Human Proteome Organization) for “development of a unique high-parameter mass cytometry technology
Dmitry_Bandura
American proteomicist
of human proteome" was ranked sixth after receiving more than 400 citations in a short period of time. Pandey has the Human Proteome Organization(HUPO)'s
Akhilesh_Pandey
Indian businessman and politician
University. In 2007, he received the Young Scientist Award from the Human Proteome Organization in Seoul, South Korea. He has published research articles on
Srinubabu_Gedela
Containers for scientific data
attempt by the Proteomics Standards Initiative (PSI) from the Human Proteome Organization (HUPO) to create a standardized format for Mass Spectrometry
Mass_spectrometry_data_format
Swiss chronobiologist
Sitges, Spain Plenary Lecture, 10th Annual World Congress of the Human Proteome Organization, Geneva, Switzerland Plenary Lecture, XII Congress of the European
Ueli_Schibler
Dutch chemist
in 2010, the Discovery Award in Proteomic Sciences from the Human Proteome Organization in 2013 and the UePA Pioneer Proteomics Award in 2014. Since
Albert_J._R._Heck
German-American molecular biologist
served as an editor for PLoS Computational Biology. 2017 US Human Proteome Organization Robert J. Cotter New Investigator Award Christine Vogel; Edward
Christine_Vogel
alongside John Yates, the Discovery Award in Proteomics from the Human Proteome Organization (2019). She also received the Jeanne Manery Fisher Memorial Lecture
Anne-Claude_Gingras
American chemist
Treasurer (2013-2015) and President (2015-2017) of the United States Human Proteome Organization. In 2017, he took a vision for improving measurement science
David_C._Muddiman
American chemist
recipient of the 2003 ACS award in Analytical Chemistry, the 2009 Human Proteome Organization (HUPO) Discovery Award in Proteomics Sciences, and was selected
Richard_D._Smith
American chemist
labeling 2018, Discovery in Proteomic Sciences Award from the Human Proteome Organization (HUPO). 2012, Biemann Medal, for work on electron-transfer dissociation
Joshua_Coon
Indian academic research organization
of Biotechnology Department of Science and Technology (India) Human Proteome Organization Wellcome Trust/DBT India Alliance IOB is affiliated with Manipal
Institute of Bioinformatics, Bengaluru
Institute_of_Bioinformatics,_Bengaluru
Public database of protein mass spectrometry data in Europe
the biggest fraction of it coming from human samples (including the data from the two draft human proteomes) followed by the fruit fly Drosophila melanogaster
Proteomics Identifications Database
Proteomics_Identifications_Database
British biological mass spectrometrist
Group of the Human Proteome Organization (HUPO)[citation needed], the Editorial Board of Scientific Reports (2017–) and Journal of Proteome Research [citation
Claire_E._Eyers
Hungarian-American chemist
Award, the Robert J. Cotter New Investigator Award by the US Human Proteome Organization, and a Research Award from the American Society for Mass Spectrometry
Peter_Nemes
Italian chemist
Human Proteome Organization. Retrieved 25 September 2019. "Awards Session (HUPO & EuPA)" (PDF). HUPO 2014 Madrid 13th Human Proteome Organization World
Pier_Giorgio_Righetti
Canadian Scientist
is a principal inventor on several patents. 2019 HUPO Award (Human Proteome Organization) Mar 2021 Establishing CD19 B-cell reference control materials
Olga_Ornatsky
South Korean chemist
2024. Between 2009 and 2011, he was the chairman of the Korean Human Proteome Organization (KHUPO). Park's research has spanned chemical biology and medicinal
Seung_Bum_Park
American chemist
since 1990 and a founding board member of the US arm of the Human Proteome Organization. He has published over 300 scientific papers and three books
Richard_Caprioli
Organ found in humans and other animals
23 August 2018. Retrieved 31 July 2016. "The human proteome in heart". www.proteinatlas.org. The Human Protein Atlas. Archived from the original on 9
Heart
Sub-discipline of biology
Degradomic studies of human tissue have also contributed to the Human Proteome Project (HPP) of the Human Proteome Organization (HUPO). The protease modulatory
Degradomics
Harmful effects of molds
the mode of antibacterial action of silver nanoparticles". Journal of Proteome Research. 5 (4): 916–24. doi:10.1021/pr0504079. PMID 16602699. Sotiriou
Mold_and_human_health
Chinese-American biologist
Spectrometry Biemann Medal 2020 Analytical Scientist Power List 2021 Human Proteome Organization (HUPO) Clinical and Translational Proteomics Award 2021 Analytical
Ying_Ge
Species of bacteria, cause of plague
Yersinia pestis using organism-wide semiquantitative proteomics". Journal of Proteome Research. 5 (11): 3008–17. doi:10.1021/pr060179y. PMID 17081052. Schiano
Yersinia_pestis
Parasitic disease also known as sleeping sickness
human African (sleeping sickness)". World Health Organization. March 2014. Archived from the original on 26 April 2014. World Health Organization (Geneva)
African_trypanosomiasis
BOINC based volunteer computing project to aid scientific research
of Human Proteome Folding Phase 2 project". World Community Grid. Archived from the original on 2019-02-04. Retrieved 2007-08-04. "Human Proteome Folding
World_Community_Grid
American analytical-biochemistry professor
Medal from the International Mass Spectrometry Society; the Human Proteome Organization's Distinguished Achievement Award in Proteomics, and the Association
Donald_F._Hunt
Research project to synthesise the human genome
Gene Nomenclature Committee Human Cytome Project Human Microbiome Project Human Proteome Project Human Protein Atlas Human Variome Project List of biological
Genome_Project–Write
Protein-coding gene in the species Homo sapiens
Gavin AC, Bösche M, Krause R, et al. (2002). "Functional organization of the yeast proteome by systematic analysis of protein complexes". Nature. 415
TRAPPC4
Protein-coding gene in the species Homo sapiens
PMID 15489334. Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8
SH3BP1
experimental collaborators, including some from industry. The IBM-sponsored Human Proteome Folding Project ("HPF"), phase 1, was announced on November 16, 2004
Grid.org
Swedish-American physicist and mass spectrometrist
Denator AB. He is also a member of the board of directors for US Human Proteome Organization (USHUPO) and serves as the treasurer. "David Fenyö, Ph.D. | NYU
David_Fenyő
Organelle in eukaryotic cells responsible for respiration
DE, Wiley S, et al. (March 2003). "Characterization of the human heart mitochondrial proteome". Nature Biotechnology. 21 (3): 281–286. Bibcode:2003NatBi
Mitochondria
Protein-coding gene in humans
Lehrach H, Wanker EE (Sep 2005). "A human protein-protein interaction network: a resource for annotating the proteome". Cell. 122 (6): 957–68. doi:10.1016/j
CHD3
Biological process of getting older
Yaobin; Jiang, Mengmeng; Xiong, Muzhao (22 July 2025). "Comprehensive human proteome profiles across a 50-year lifespan reveal aging trajectories and signatures"
Ageing
Community of microorganisms in human milk
human milk microbiota, also known as human milk probiotics (HMP), encompasses the microbiota–the community of microorganisms–present within the human
Human_milk_microbiome
Vertebrate organ involved in metabolism
from the original on 2015-06-26. Retrieved 2015-06-26. "The human proteome in liver – The Human Protein Atlas". www.proteinatlas.org. Archived from the original
Liver
Protein-coding gene in humans
PMID 15489334. Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8
PSG3
Protein-coding gene in the species Homo sapiens
2020-09-10. Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8
Gamma-glutamyl_hydrolase
German bioinformatician
is involved in several international collaborations like the Human Proteome Organization (HUPO) Proteomics Standards Initiative. Apweiler is a member
Rolf_Apweiler
Rod-shaped, gram-negative bacterium
horizontal transfer. Several studies have experimentally investigated the proteome of E. coli. By 2006, 1,627 (38%) of the predicted proteins (open reading
Escherichia_coli
Species of protozoan parasite
brucei infecting Glossina palpalis gambiensis, the parasite changes the proteome contents of the fly's head and causes behavioral changes such as unnecessarily
Trypanosoma_brucei
Hypothetical process of digitally emulating a brain
high-level patterns of organization that could be realized in other processing devices. Mind uploading relies on the idea that the human mind reduces to neural
Mind_uploading
Field of biology
large-scale structural and functional relationships of the human genome, transcriptome, proteome and metabolome, with a particular focus on devising new
Medical_biology
Organ of the digestive system and endocrine system of vertebrates
14701/kjhbps.2012.16.1.43. PMC 4575014. PMID 26388905. "The human proteome in pancreas – The Human Protein Atlas". www.proteinatlas.org. Archived from the
Pancreas
Protein-coding gene in the species Homo sapiens
L, Cusick ME, Hill DE, Roth FP, Vidal M (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8
PRC1
Protein-coding gene in the species Homo sapiens
Apweiler R, Ge J, Hermjakob H, Ping P (October 2013). "Integration of cardiac proteome biology and medicine by a specialized knowledgebase". Circulation Research
Filamin-C
Protozoan species of malaria parasite
are targeted to the apicoplast, while 4.7% of the proteome is targeted to the mitochondria. Humans are the intermediate hosts in which asexual reproduction
Plasmodium_falciparum
Species of virus
sites in the viral polyprotein. PHI-BLAST can be used to search the human proteome for predicted viral protease cleavage sites. Cleavage of host proteins
Enterovirus_71
Protein-coding gene in the species Homo sapiens
S2CID 7200157. Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8
PHB2
State of steady internal conditions maintained by living things
lower concentration Proteostasis – Process of regulating a functional proteome Senescence – Deterioration of function with age Steady state – When concentrations
Homeostasis
Species of Old World monkey
Jacobs, T. M.; Smith, J. M.; Katze, R. D.; Michael, G. (2010). "Macaque proteome response to highly pathogenic avian influenza and 1918 reassortant influenza
Rhesus_macaque
Discipline in genetics
used to address the objects of study of such fields, such as the genome, proteome, or metabolome (lipidome) respectively. The suffix -ome as used in molecular
Genomics
Group of venomous snakes from Asia
; Fung, S. Y.; Tan, N. H. (2015). "Venom-gland transcriptome and venom proteome of the Malaysian king cobra (Ophiophagus hannah)". BMC Genomics. 16 (1):
King_cobra
Protein-coding gene in humans
H, Wanker EE (September 2005). "A human protein-protein interaction network: a resource for annotating the proteome". Cell. 122 (6): 957–68. doi:10.1016/j
ATF3
Professor of biochemistry
for Distinguished Achievement in Proteomic Sciences from the Human Proteome Organization (HuPO) in 2018. "Kathryn Lilley". Department of Biochemistry
Kathryn_S_Lilley
Genus of disease-spreading insects
infecting G. p. gambiensis, during this time the parasite changes the proteome contents of the fly's head. This may be the reason/a reason for the behavioral
Tsetse_fly
Protein-coding gene in the species Homo sapiens
U, Lalowski M, et al. (2005). "A human protein-protein interaction network: a resource for annotating the proteome". Cell. 122 (6): 957–68. doi:10.1016/j
TMEM216
Protein found in humans
Goehler H, et al. (September 2005). "A human protein-protein interaction network: a resource for annotating the proteome". Cell. 122 (6): 957–968. doi:10.1016/j
TAR_DNA-binding_protein_43
Virus that causes SARS
J.; et al. (2003-08-29). "Unique and conserved features of genome and proteome of SARS-coronavirus, an early split-off from the coronavirus group 2 lineage"
SARS-CoV-1
Protein-coding gene in the species Homo sapiens
PMID 15489336. Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8
FTS and Hook-interacting protein
FTS_and_Hook-interacting_protein
Protein and coding gene in humans
Hirozane-Kishikawa T, Dricot A, Li N, et al. (October 2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8
Transforming_protein_RhoA
Family of flies commonly known as no see ums, or biting midges
T. S. Keshava; Kumar, Ashwani (2017-08-01). "Data from salivary gland proteome analysis of female Aedes aegypti Linn". Data in Brief. 13: 274–277. Bibcode:2017DIB
Ceratopogonidae
Protein-coding gene in humans
Cusick ME, Hill DE, Roth FP, Vidal M (Oct 2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8
BRCC3
Process of introducing a phosphate group on to a protein
R (2002). "Proteome analysis of low-abundance proteins using multidimensional chromatography and isotope-coded affinity tags". J. Proteome Res. 1 (1):
Protein_phosphorylation
Species of bacterium
antibiotics. According to the World Health Organization P. aeruginosa poses one of the greatest threats to humans in terms of antibiotic resistance. The organism
Pseudomonas_aeruginosa
HUMAN PROTEOME-ORGANIZATION
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HUMAN PROTEOME-ORGANIZATION
HUMAN PROTEOME-ORGANIZATION
HUMAN PROTEOME-ORGANIZATION
HUMAN PROTEOME-ORGANIZATION
HUMAN PROTEOME-ORGANIZATION