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CONDENSIN

  • Condensin
  • Protein complex

    different types of condensin complexes, known as condensin I and condensin II, each of which is composed of five subunits (Figure 2). Condensins I and II share

    Condensin

    Condensin

    Condensin

  • Chromosome condensation
  • Process in mitosis and meiosis

    types of condensin complexes, condensin I and condensin II, which partially overlap in function. In some organisms or cell types, condensin I alone is

    Chromosome condensation

    Chromosome condensation

    Chromosome_condensation

  • Loop extrusion
  • Mechanism of nuclear organization

    grow loops of DNA or chromatin. In this process, SMC complexes, such as condensin or cohesin, bind to DNA/chromatin, use ATP-driven motor activity to reel

    Loop extrusion

    Loop_extrusion

  • SMC4
  • Protein-coding gene in the species Homo sapiens

    that in humans is encoded by the SMC4 gene. SMC-4 is a core subunit of condensin I and II, large protein complexes involved in high order chromosome organization

    SMC4

    SMC4

    SMC4

  • NCAPG
  • Protein-coding gene in the species Homo sapiens

    Condensin complex subunit 3 also known as condensin subunit CAP-G (CAP-G) or non-SMC condensin I complex subunit G (NCAPG) is a protein that in humans

    NCAPG

    NCAPG

    NCAPG

  • SMC protein
  • function as the core ATPase subunits of large protein complexes such as condensin, cohesin, and SMC5/6. The term SMC derives from a mutant strain of Saccharomyces

    SMC protein

    SMC_protein

  • SMC2
  • Protein-coding gene in the species Homo sapiens

    non-SMC regulatory proteins to form condensin. In condensin I, SMC2 complexes with CAP-H, CAP-D2, and CAP-G. In condensin II, SMC2 complexes with CAP-H2,

    SMC2

    SMC2

    SMC2

  • NCAPH
  • Protein-coding gene in the species Homo sapiens

    Condensin complex subunit 2 also known as chromosome-associated protein H (CAP-H) or non-SMC condensin I complex subunit H (NCAPH) is a protein that in

    NCAPH

    NCAPH

    NCAPH

  • NCAPD3
  • Protein-coding gene in the species Homo sapiens

    Condensin-2 complex subunit D3 (CAP-D3) also known as non-SMC condensin II complex subunit D3 (NCAPD3) is a protein that, in humans, is encoded by the

    NCAPD3

    NCAPD3

    NCAPD3

  • Chromosome scaffold
  • Proteic structure inside chromosomes

    identified as the main components of the scaffold: DNA topoisomerase IIα, condensins, and the KIF4A kinesin. When these proteins are removed, the chromosome

    Chromosome scaffold

    Chromosome_scaffold

  • NCAPG2
  • Protein-coding gene in the species Homo sapiens

    Condensin-2 complex subunit G2 (CAP-G2) also known as chromosome-associated protein G2 (CAP-G2) or leucine zipper protein 5 (LUZP5) is a protein that

    NCAPG2

    NCAPG2

    NCAPG2

  • NCAPD2
  • Protein-coding gene in the species Homo sapiens

    Condensin complex subunit 1 also known as chromosome-associated protein D2 (CAP-D2) or non-SMC condensin I complex subunit D2 (NCAPD2) or XCAP-D2 homolog

    NCAPD2

    NCAPD2

    NCAPD2

  • Chromatin
  • Complex of DNA and protein in eukaryotic cells

    order structures. Chromosome scaffolds are made of proteins including condensin, type IIA topoisomerase and kinesin family member 4 (KIF4). The physical

    Chromatin

    Chromatin

  • NCAPH2
  • Protein-coding gene in the species Homo sapiens

    Condensin-2 complex subunit H2, also known as chromosome-associated protein H2 (CAP-H2) or non-SMC condensin II complex subunit H2 (NCAPH2), is a protein

    NCAPH2

    NCAPH2

    NCAPH2

  • Chromosome
  • DNA molecule containing genetic material of a cell

    ten-thousand-fold. The chromosome scaffold, which is made of proteins such as condensin, TOP2A and KIF4, plays an important role in holding the chromatin into

    Chromosome

    Chromosome

    Chromosome

  • Cohesin
  • Protein complex that regulates the separation of sister chromatids during cell division

    Cohesin is a member of the SMC family of protein complexes which includes Condensin, MukBEF and SMC-ScpAB. Cohesin was separately discovered in budding yeast

    Cohesin

    Cohesin

    Cohesin

  • Nondisjunction
  • Failure to separate properly during cell division

    in mitosis can be attributed to the inactivation of topoisomerase II, condensin, or separase. Meiotic nondisjunction has been well studied in Saccharomyces

    Nondisjunction

    Nondisjunction

    Nondisjunction

  • HEAT repeat
  • Protein tandem repeat

    importin β (also known as karyopherin β) family, regulatory subunits of condensin and cohesin, separase, PIKKs (phosphatidylinositol 3-kinase-related protein

    HEAT repeat

    HEAT repeat

    HEAT_repeat

  • Perinucleolar compartment
  • Chromatin Dot (PML body) Paraspeckle SMC protein: Cohesin SMC1A SMC1B SMC3 Condensin NCAPD2 NCAPD3 NCAPG NCAPG2 NCAPH NCAPH2 SMC2 SMC4 DNA repair SMC5 SMC6

    Perinucleolar compartment

    Perinucleolar_compartment

  • DNA supercoil
  • Amount of twist in a particular DNA strand

    sister DNAs are segregated into daughter cells. It has been shown that condensin, a large protein complex that plays a central role in mitotic chromosome

    DNA supercoil

    DNA supercoil

    DNA_supercoil

  • Homologous somatic pairing
  • organisation (or the direct interactions of topoisomerase enzymes) in pairing. Condensin (despite dependent interactions with Topoisomerase II) is antagonistic

    Homologous somatic pairing

    Homologous somatic pairing

    Homologous_somatic_pairing

  • Prophase
  • First phase of mitosis and meiosis

    lengths reaching 0.7 μm down to 0.2-0.3 μm. This process employs the condensin complex. Condensed chromosomes consist of two sister chromatids joined

    Prophase

    Prophase

    Prophase

  • Hydra (genus)
  • Genus of cnidarians

    to other cnidarians, probably due to the loss of multiple subunits of condensin II. It is organized in domains that span dozens to hundreds of megabases

    Hydra (genus)

    Hydra (genus)

    Hydra_(genus)

  • Non-histone protein
  • Class of proteins

    modulation likely has implications for neuronal function. Chromatin Cohesin Condensin Fedele, Monica (2006). Encyclopedic reference of genomics and proteomics

    Non-histone protein

    Non-histone_protein

  • Nucleoid
  • Region within a prokaryotic cell containing genetic material

    "Multiscale Structuring of the E. coli Chromosome by Nucleoid-Associated and Condensin Proteins". Cell. 172 (4): 771–783.e18. doi:10.1016/j.cell.2017.12.027

    Nucleoid

    Nucleoid

    Nucleoid

  • Immunolabeling
  • Procedure for detection and localization of an antigen

    of immunolabeling chromosome structures, such as topoisomerase IIα and condensin in dissected mitotic chromosomes. In particular, these investigators used

    Immunolabeling

    Immunolabeling

    Immunolabeling

  • Chromomere
  • Definition of scientific term

    also present at high concentrations within the chromomere, and acts as a condensin component. High concentrations of tandem repeats of the heterochromatin

    Chromomere

    Chromomere

    Chromomere

  • Aurora kinase B
  • Protein

    In these cells, the condensin complex does not localize appropriately to the chromosomes. Similarly, in C. elegans, condensin activity is dependent

    Aurora kinase B

    Aurora kinase B

    Aurora_kinase_B

  • Xenopus egg extract
  • Cell-free system

    Identification of importin α/β responsible for nuclear transport Discovery of the condensin complex essential for mitotic chromosome assembly Identification of the

    Xenopus egg extract

    Xenopus_egg_extract

  • Spindle apparatus
  • Feature of biological cell structure

    decatenation of DNA entanglements, promoting sister chromatid resolution. Condensins are 5-subunit complexes that also use ATP-hydrolysis to promote chromosome

    Spindle apparatus

    Spindle apparatus

    Spindle_apparatus

  • Retinoblastoma protein
  • Mammalian protein found in humans

    pRb has been shown to also be able to recruit protein complexes such as condensin and cohesin to assist in the structural maintenance of chromatin. Such

    Retinoblastoma protein

    Retinoblastoma protein

    Retinoblastoma_protein

  • Timeline of biotechnology
  • Claire; et al. (28 May 2021). "3D genomics across the tree of life reveals condensin II as a determinant of architecture type". Science. 372 (6545): 984–989

    Timeline of biotechnology

    Timeline_of_biotechnology

  • Kinetochore
  • Protein complex that allows microtubules to attach to chromosomes during cell division

    progression, and that it interacts with components of the cohesin and condensin complexes. Different laboratories have shown that the Ndc80 complex is

    Kinetochore

    Kinetochore

    Kinetochore

  • Kavli Institute of Nanoscience
  • Institute of Delft University of Technology

    their publication entitled 'Real-time imaging of DNA loop extrusion by condensin' appeared in Science in 2018. "Home - Kavli Institute of Nanoscience Delft"

    Kavli Institute of Nanoscience

    Kavli_Institute_of_Nanoscience

  • Topologically associating domain
  • Self-interacting genomic region

    Dekker, Struhl K, Mirny LA, Musacchio A, Marko JF (eds.). "Cohesin and condensin extrude DNA loops in a cell cycle-dependent manner". eLife. 9 e53885.

    Topologically associating domain

    Topologically associating domain

    Topologically_associating_domain

  • SBP-tag
  • Amino acid sequence

    conditions in which desired complexes remain associated. For example, the Condensin Complex was purified by Kim et al. [2010] and complexes with the TAZ transcriptional

    SBP-tag

    SBP-tag

  • Hi-C (genomic analysis technique)
  • Genomic analysis technique

    Edward J.; Uzawa, Satoru; Dekker, Job; Meyer, Barbara J. (July 2015). "Condensin-driven remodelling of X chromosome topology during dosage compensation"

    Hi-C (genomic analysis technique)

    Hi-C (genomic analysis technique)

    Hi-C_(genomic_analysis_technique)

  • Sex-chromosome dosage compensation
  • Biological process

    regulated change in transcription levels. The DCC is often compared to the condensin complex, which is conserved across the mitotic and meiotic processes of

    Sex-chromosome dosage compensation

    Sex-chromosome dosage compensation

    Sex-chromosome_dosage_compensation

  • Simon Boulton
  • British scientist

    doi:10.1016/j.cell.2012.03.030. PMID 22579284. Boulton, S. J. (2009). "Condensin(g) crossover control to a few breaks". Cell. 139 (1): 21–3. doi:10.1016/j

    Simon Boulton

    Simon_Boulton

  • Maturation promoting factor
  • Biological factor

    Promotes mitosis i.e. chromatin condensation through phosphorylation of condensins. The three lamins present in the nuclear lamina, lamin A, B & C, are phosphorylated

    Maturation promoting factor

    Maturation_promoting_factor

  • Institute of Molecular Biotechnology
  • Austrian biomedical research organisation

    First multi-chamber heart organoids 2022: Disentanglement of the roles of condensin and histone deacetylation in chromosome assembly and chromatin compaction

    Institute of Molecular Biotechnology

    Institute of Molecular Biotechnology

    Institute_of_Molecular_Biotechnology

  • SMC5
  • Protein-coding gene in the species Homo sapiens

    structural maintenance chromosomes consists of cohesin (SMC1 AND SMC3), condensin (SMC2 and SMC4), and SMC5/6 complexes. The Smc5/6 complex was discovered

    SMC5

    SMC5

    SMC5

  • C3orf80
  • Human gene

    of IFT complex B BRD7P2 Plus strand 160,100,691-160,102,912 Pseudogene of BRD7 SMC4 Plus strand 160,399,274-160,434,954 Part of the condensin complex

    C3orf80

    C3orf80

    C3orf80

  • Scaffold protein
  • Type of protein, regulators of signalling pathways

    compact chromosome. Chromosome scaffold is made of proteins including condensin, topoisomerase IIα and kinesin family member 4 (KIF4) Chromosome scaffold

    Scaffold protein

    Scaffold protein

    Scaffold_protein

  • David Glover (geneticist)
  • British geneticist

    "Drosophila aurora B kinase is required for histone H3 phosphorylation and condensin recruitment during chromosome condensation and to organize the central

    David Glover (geneticist)

    David_Glover_(geneticist)

  • Angelika Amon
  • Austrian American academic molecular and cell biologist (1967–2020)

    D'Armours, Damien; Stegmeier, Frank; Amon, Angelika (2004). "Cdc14 and Condensin Control the Dissolution of Cohesin-Independent Chromosome Linkages at

    Angelika Amon

    Angelika Amon

    Angelika_Amon

  • AKAP8
  • Protein-coding gene in the species Homo sapiens

    overlapping domains of AKAP95 are implicated in chromosome condensation and condensin targeting". EMBO Rep. 3 (5): 426–32. doi:10.1093/embo-reports/kvf089.

    AKAP8

    AKAP8

    AKAP8

  • Pachytene
  • Third stage of Prophase I of Meiosis

    Raymond C.; Severson, Aaron F.; Meyer, Barbara J. (22 November 2004). "Condensin restructures chromosomes in preparation for meiotic divisions". The Journal

    Pachytene

    Pachytene

  • DNA condensation
  • Process of compacting DNA molecules

    compact chromosome. Chromosome scaffold is made of proteins including condensin, topoisomerase IIα and kinesin family member 4 (KIF4) Dinoflagellates

    DNA condensation

    DNA condensation

    DNA_condensation

  • RNA-directed DNA methylation
  • RNA-based gene silencing process

    Tan EH, Wang F, Pikaard CS (August 2017). "Arabidopsis SMC4 identifies condensin as a corepressor of pericentromeric transposons and conditionally expressed

    RNA-directed DNA methylation

    RNA-directed DNA methylation

    RNA-directed_DNA_methylation

  • Macrophage-capping protein
  • Protein-coding gene in the species Homo sapiens

    1016/0378-1119(94)90802-8. PMID 8125298. Hirano T, Kobayashi R, Hirano M (1997). "Condensins, chromosome condensation protein complexes containing XCAP-C, XCAP-E and

    Macrophage-capping protein

    Macrophage-capping protein

    Macrophage-capping_protein

  • Reverse gyrase
  • Class of DNA-supercoiling enzymes

    supercoiling has been found in mesophilic organisms. For example, telomeres and condensins can both utilize positive supercoiling as a means for contributing to

    Reverse gyrase

    Reverse gyrase

    Reverse_gyrase

  • Cdc14
  • eliminating ribosomal RNA (rRNA) transcripts that otherwise would block condensin binding to rDNA. In S. cerevisiae, Cdc14 is regulated by its competitive

    Cdc14

    Cdc14

  • SMC1B
  • Protein-coding gene in the species Homo sapiens

    and can be broken into 3 groups based on function which are cohesins, condensins, and DNA repair. SMC-1B belongs to a family of proteins required for chromatid

    SMC1B

    SMC1B

    SMC1B

  • Cyclin B1
  • Protein-coding gene in the species Homo sapiens

    of early mitosis. The active complex phosphorylates and activates 13S condensin, which helps to condense chromosomes. Another important function of the

    Cyclin B1

    Cyclin B1

    Cyclin_B1

  • Transcriptional regulation
  • Control of DNA to RNA conversion in cells

    TFIIIC that help recruiting structural partners such as cohesins and condensins. The localization and binding of architectural proteins to their corresponding

    Transcriptional regulation

    Transcriptional_regulation

  • Caspase-activated DNase
  • Protein found in humans

    Wong CH, Lee YP, Li HY (June 2011). "Caspase-3-mediated degradation of condensin Cap-H regulates mitotic cell death". Cell Death and Differentiation. 18

    Caspase-activated DNase

    Caspase-activated DNase

    Caspase-activated_DNase

  • 2021 in science
  • Claire; et al. (28 May 2021). "3D genomics across the tree of life reveals condensin II as a determinant of architecture type". Science. 372 (6545): 984–989

    2021 in science

    2021 in science

    2021_in_science

  • DNA curtain
  • Single-molecule imaging technique

    Musacchio, Andrea; Vannini, Alessandro; Greene, Eric C. (2020). "Human Condensin I and II Drive Extensive ATP-Dependent Compaction of Nucleosome-Bound

    DNA curtain

    DNA_curtain

  • April–June 2021 in science
  • Overview of the events of 2021 in science

    Claire; et al. (28 May 2021). "3D genomics across the tree of life reveals condensin II as a determinant of architecture type". Science. 372 (6545): 984–989

    April–June 2021 in science

    April–June_2021_in_science

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