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Species of archaeon
to Pyrococcus furiosus that were not originally annotated, bringing the number of ORFs up to 2,082. A genetically tractable strain of Pyrococcus furiosus
Pyrococcus_furiosus
Genus of archaea
Pyrococcus is a genus of Thermococcaceaen archaeans. Pyrococcus has similar characteristics of other thermoautotrophican archaea such as Archaeoglobus
Pyrococcus
Species of archaeon
Euryarchaeota Pyrococcus abyssi". Frontiers in Microbiology. 5 (403): 403. doi:10.3389/fmicb.2014.00403. PMC 4134008. PMID 25177316. "Pyrococcus abyssi". The
Pyrococcus_abyssi
Species of archaeon
the Thermococcales order. Palaeococcus, Pyrococcus, and Τhermococcus, and most are organoheterotrophs. Pyrococcus chitonophagus is the new name for this
Pyrococcus_chitonophagus
Species of archaeon
of Kodakara Island, Kagoshima, Japan. The isolate was originally named Pyrococcus kodakarensis KOD1, but reclassified as a species of Thermococcus, based
Thermococcus_kodakarensis
Anaerobic, hyperthermophilic archaeon
percent guanine-cytosine DNA content with Pyrococcus furiosus being its closest species relative. Pyrococcus yayanosii are unicellular organisms that are
Pyrococcus_yayanosii
Organism that consists of only one cell
temperature of 50 °C-110 °C, including the genera Pyrobaculum, Pyrodictium, Pyrococcus, Thermus aquaticus and Melanopyrus. Psychrophiles, optimum growth temperature
Unicellular_organism
Species of archaeon
30,000 gray (Gy) of gamma rays. Along with the genera Palaeococcus and Pyrococcus, Thermococcus belongs to the Thermococcaceae family, sole family of the
Thermococcus_gammatolerans
Enzyme
Pfu DNA polymerase is an enzyme found in the hyperthermophilic archaeon Pyrococcus furiosus, where it functions to copy the organism's DNA during cell division
Pfu_DNA_polymerase
Species of archaeon
(October 2004). "A proposal to rename the hyperthermophile Pyrococcus woesei as Pyrococcus furiosus subsp. woesei". Archaea. 1 (4): 277–83. doi:10.1155/2004/513563
Pyrococcus_woesei
RNA family
molecular biology, Pyrococcus C/D box small nucleolar RNA are non-coding RNA (ncRNA) molecules identified in the archaeal genus Pyrococcus which function
Pyrococcus C/D box small nucleolar RNA
Pyrococcus_C/D_box_small_nucleolar_RNA
Species of archaeon
2012.10.028. PMID 23137517. "Pyrococcus horikoshii". The Encyclopedia of Life. WORMS entry LPSN Type strain of Pyrococcus horikoshii at BacDive - the Bacterial
Pyrococcus_horikoshii
Organisms capable of living in extreme environments
oceanic crust 110 °C (230 °F) to 122 °C (252 °F) Pyrolobus fumarii, Pyrococcus furiosus, Methanopyrus kandlerii, other species Low temperature Ice −20 °C
Extremophile
Active volcanic island off the northern coast of Sicily, Italy
thermophiles and hyperthermophiles are found. The hyperthermophilic archaean Pyrococcus furiosus was described for the first time when it was isolated from sediments
Vulcano
Open-source Java viewer for 3D chemical structures
translucent molecular orbital. Crystal structure of an H/ACA box RNP from Pyrococcus furiosus Highlighting two salt bridges in hemoglobin tetramer (hemo group
Jmol
Macromolecular machine that synthesizes proteins in cells
30S subunit and three on the 50S subunit. "Genome annotation search: Pyrococcus furiosus DSM 3638 genome assembly ASM730v1, Type: rRNA". NCBI. Ben-Shem
Ribosome
Class of archaea
Thermococcus and Pyrococcus (literally "balls of fire") are both obligately anaerobic chemoorganotrophs. Thermococcus prefers 70–95 °C and Pyrococcus 70-100 °C
Thermococci
Domain of organisms
example, thermostable DNA polymerases, such as the Pfu DNA polymerase from Pyrococcus furiosus, revolutionized molecular biology by allowing the polymerase
Archaea
Enzymes that catalyze DNA formation
heat-stable enzyme of this family found in the hyperthermophilic archaeon Pyrococcus furiosus. Detailed classification divides family B in archaea into B1
DNA_polymerase
Enzyme
of the glyoxylate reductase enzyme from the hyperthermophilic archeon Pyrococcus horiskoshii OT3 has been reported. The enzyme exists in the dimeric form
Glyoxylate_reductase
Protein that plays a role in RNA silencing process
of Illinois reported using a prokaryotic Argonaute protein taken from Pyrococcus furiosus (PfAgo) along with guide DNA to edit DNA in vitro as artificial
Argonaute
Chemical element with atomic number 74 (W)
litoralis Glyceraldehyde-3-phosphate ferredoxin oxidoreductase (GAPOR) in Pyrococcus furiosus A wtp system is known to selectively transport tungsten in archaea:
Tungsten
DNA polymerases that originate from thermophiles
1, AB022670.1) are identical to parts from the Pyrococcus kukulkanii LMOA42 genome. Formerly Pyrococcus kodakarensis, hence Pfx. "Thermus flavus AT-62
Thermostable_DNA_polymerase
Class of enzymes
activity. It has also been found in other thermophilic bacteria including Pyrococcus horikoshii, Rubrobacter xylanophilus, and Thermoproteus tenax. Enzyme
Alpha,alpha-trehalose synthase
Alpha,alpha-trehalose_synthase
Chemical compound
It has been reported from bacteria of the genus Thermus and also in Pyrococcus horikoshii, potentially suggesting a wider distribution than previously
Α-Aminoadipate_pathway
2017 single by Charlie Puth
Anders Remix) – 7:27 "Attention" (Einmeier Remix) – 4:27 "Attention" (Pyrococcus Remix) – 8:10 South Korean singer Ken of the boy band VIXX recorded a
Attention_(Charlie_Puth_song)
American microbiologist (1928–2012)
foreign member of the Royal Society. Many microbial species, such as Pyrococcus woesei, Methanobrevibacter woesei, and Conexibacter woesei, are named
Carl_Woese
Amino acid
alternative variant of the AAA route has been found in Thermus thermophilus and Pyrococcus horikoshii, which could indicate that this pathway is more widely spread
Lysine
Chemical compound which is reduced and oxidized
bacteria such as Mycobacterium tuberculosis and a hyperthermophilic archaeon Pyrococcus horikoshii, use inorganic polyphosphate as an alternative phosphoryl donor
Nicotinamide adenine dinucleotide
Nicotinamide_adenine_dinucleotide
Organism that thrives in extremely hot environments from 60°C upward
about sugar catabolism in hyperthermophiles comes from observation on Pyrococcus furiosus. It grows on many different sugars such as starch, maltose, and
Hyperthermophile
Biological process of gene regulation
Left: A full-length Argonaute protein from the archaea species Pyrococcus furiosus. Right: The PIWI domain of an Argonaute protein in complex with double-stranded
RNA_interference
W. (December 2004). "Rubrerythrin from the Hyperthermophilic Archaeon Pyrococcus furiosus Is a Rubredoxin-Dependent, Iron-Containing Peroxidase". Journal
Rubrerythrin
Family of DNA sequences found in prokaryotic organisms
although a CRISPR-Cas system that targets foreign RNA was later found in Pyrococcus furiosus. A 2010 study reported that CRISPR-Cas cuts strands of both phage
CRISPR
"2-keto acid oxidoreductases from Pyrococcus furiosus and Thennococcus litoralis". 2-keto acid oxidoreductases from Pyrococcus furiosus and Thermococcus litoralis
Indolepyruvate ferredoxin oxidoreductase
Indolepyruvate_ferredoxin_oxidoreductase
Iron–sulfur proteins that mediate electron transfer in metabolic reactions
including four cysteine residues that bind to a [Fe4S4] cluster. In Pyrococcus furiosus Fe4S4 ferredoxin, one of the conserved Cys residues is substituted
Ferredoxin
widely studied organisms for pyruvate, water dikninase is Pyrococcus furiosus. Pyrococcus furiosus is a deep sea hyperthermophilic archaea that is commonly
Pyruvate,_water_dikinase
Organisms living under high hydrostatic pressure
bottom of Mariana Trench. The first thermophilic piezophilic archaea Pyrococcus yayanosii strain CH1 was isolated from the Ashadze site, a deep sea hydrothermal
Piezophile
Genes and regulatory proteins
Piwi domain Structure of the Pyrococcus furiosus Argonaute protein. Identifiers Symbol Piwi Pfam PF02171 InterPro IPR003165 PROSITE PS50822 CDD cd02826
Piwi
Non-protein chemical compound or metallic ion
in the aldehyde ferredoxin oxidoreductase of the thermophilic archaean Pyrococcus furiosus, and even cadmium in the carbonic anhydrase from the marine diatom
Cofactor_(biochemistry)
1997). "Unusual fatty acid compositions of the hyperthermophilic archaeon Pyrococcus furiosus and the bacterium Thermotoga maritima". Journal of Bacteriology
Branched-chain dicarboxylic acids
Branched-chain_dicarboxylic_acids
Class of enzymes
The active site of a thermoactive nitrilase from Pyrococcus abyssi, detailing the Lys-Cys-Glu catalytic triad responsible for cleaving C-N bonds. Unfortunately
Nitrilase
Genus of archaea
single-strand specific 3'-5' exonuclease found in the hyperthermophilic archaeon, Pyrococcus furiosus". PLOS ONE. 8 (3) e58497. Bibcode:2013PLoSO...858497T. doi:10
Thermococcus
Structure on the cell surface of many archaea that allows for swimming motility
Methanocaldococcus jannaschii in 1996, Archaeoglobus fulgidus in 1997, and Pyrococcus horikoshii in 1998. Although genes of archaellins were identified in all
Archaellum
Protein-coding gene in the species Homo sapiens
solved structure of prolidase came from the hyperthermophilic archaeon Pyrococcus furiosus (Pfprol). This dimer has a crystal structure shows two approximately
PEPD
Extremophile species of bacterium
ionizing radiations. Extremophiles List of sequenced bacterial genomes Pyrococcus Radiosynthesis (metabolism) Radiotrophic fungus Thermococcus gammatolerans
Deinococcus_radiodurans
Protein-coding gene in the species Homo sapiens
Fibrillarin pyrococcus horikoshii fibrillarin pre-rrna processing protein Identifiers Symbol Fibrillarin Pfam PF01269 Pfam clan CL0063 InterPro IPR000692
Fibrillarin
Protein domain
the pala-liganded aspartate transcarbamoylase catalytic subunit from pyrococcus abyssi Identifiers Symbol OTCace_N Pfam PF02729 InterPro IPR006132 PROSITE
ATCase/OTCase_family
RNA family
(May 2008). "Combined in silico and experimental identification of the Pyrococcus abyssi H/ACA sRNAs and their target sites in ribosomal RNAs". Nucleic
HgcF_RNA
German microbiologist
May 2002. Among the other extremophiles discovered by Stetter has been Pyrococcus furiosus, which was found on the Italian island of Vulcano in 1981. This
Karl_Stetter
Protein family
alpha-amylase with a broad substrate specificity from the archaebacterium Pyrococcus furiosus. GH57 in CAZypedia Henrissat B, Callebaut I, Mornon JP, Fabrega
Glycoside_hydrolase_family_57
Enzyme of the glycolysis metabolic pathway
domain crystal structure of glyceraldehyde-3-phosphate dehydrogenase from pyrococcus horikoshii ot3 Identifiers Symbol Gp_dh_C Pfam PF02800 Pfam clan CL0139
Glyceraldehyde 3-phosphate dehydrogenase
Glyceraldehyde_3-phosphate_dehydrogenase
Cellular appendage functioning as locomotive or sensory organelle
rotates as a single assembly -(Citation? It seems to not be the case in Pyrococcus furiosus). Bacterial flagella grow by the addition of flagellin subunits
Flagellum
Enzyme involved in tryptophan synthesis
the above listed microorganisms. The known 2.0 A structure of PRAI from Pyrococcus furiosus shows that tPRAI has a TIM-barrel fold (Fig. 6). PRAI derived
Phosphoribosylanthranilate isomerase
Phosphoribosylanthranilate_isomerase
Species of archaeon
any other thermophilic archaebacteria species. T. celer is related to Pyrococcus woesei, both belonging to the order Thermococcales. Both are strictly
Thermococcus_celer
Family Thermococcaceae Zillig et al. 1988 Palaeococcus Takai et al. 2000 Pyrococcus Fiala & Stetter 1986 Thermococcus Zillig 1983 ["Caldococcus" Svetlichny
List_of_Archaea_genera
Class of enzymes that divide DNA
University of Illinois reported using an Argonaute protein taken from Pyrococcus furiosus (PfAgo) along with guide DNA to edit DNA in vitro as artificial
Restriction_enzyme
Protein family
to designate hydrogenase structural genes in Thermococcus litoralis, Pyrococcus abyssi, and other species. MEROPS family A31 Casalot L, Rousset M (May
Hydrogenase maturation protease family
Hydrogenase_maturation_protease_family
Type of coupling used in NMR spectroscopy
1H–113Cd and 1H–199Hg J couplings in metal-substituted rubredoxin from Pyrococcus furiosus". J. Biomol. NMR. 2 (5): 527–533. doi:10.1007/BF02192814. PMID 1422158
J-coupling
American scientist and academic
(1 October 2004). "Structure of a glutamate transporter homologue from Pyrococcus horikoshii". Nature. 431 (7010): 811–818. doi:10.1038/NATURE03018. ISSN 1476-4687
Olga_Boudker
Protein family
an archaeal DNA sliding clamp: proliferating cell nuclear antigen from Pyrococcus furiosus". Protein Science. 10 (1): 17–23. doi:10.1110/ps.36401. PMC 2249843
DNA_clamp
Class of enzymes
"Crystallization and preliminary X-ray analysis of endoglucanase from Pyrococcus horikoshii". Acta Crystallographica. Section F, Structural Biology and
Β-Glucuronidase
Various uses and techniques of polymerase chain reaction in the laboratory
(P52028) from Thermus thermophilus, has seen some use. The archean genus Pyrococcus has proven a rich source of thermostable polymerases with proofreading
Variants_of_PCR
Protein-coding gene in humans
cobalt-dependent proline dipeptidase (prolidase) from the hyperthermophilic archaeon Pyrococcus furiosus". J. Bacteriol. 180 (18): 4781–9. doi:10.1128/JB.180.18.4781-4789
METAP2
Protein family
these two proteins is TFB, which was first identified in the species Pyrococcus woesei in 1992. Since then, research has found that archaeal species must
Archaeal transcription factor B
Archaeal_transcription_factor_B
Order of archaea
W; Holz I; Klenk HP; Trent J; Wunderl S; Janekovic D; et al. (1987). "Pyrococcus woesei, sp. nov., an ultra-thermophilic marine Archaebacterium, representing
Thermococcales
Class of enzymes
Gopalan, V. (2006). "Functional reconstitution and characterization of Pyrococcus furiosus RNase P". PNAS. 103 (44): 16147–16152. Bibcode:2006PNAS..10316147T
Ribonuclease_P
Class of enzymes
Hirai R, Kawarabayasi Y, Sakai Y, Kato N (June 2005). "The archaeon Pyrococcus horikoshii possesses a bifunctional enzyme for formaldehyde fixation via
3-hexulose-6-phosphate synthase
3-hexulose-6-phosphate_synthase
Protein family
oxidoreductases. AOR is found in hyperthermophillic archaea, Pyrococcus furiosus. The archaeons Pyrococcus ES-4 strain and Thermococcus ES-1 strain differ by their
Aldehyde ferredoxin oxidoreductase
Aldehyde_ferredoxin_oxidoreductase
B07 prefixes
MeSH B07.200.825.800.650 – pyrococcus MeSH B07.200.825.800.650.020 – pyrococcus abyssi MeSH B07.200.825.800.650.300 – pyrococcus furiosus MeSH B07.200.825
List_of_MeSH_codes_(B07)
Ability of a substance to resist changes in structure under high temperatures
in the purification of alkaline phosphatase from the hyperthermophile Pyrococcus abyssi. This enzyme is known for being heat stable at temperatures greater
Thermostability
Enzyme
"Expression, Purification, and Characterisation of Dehydroquinate Synthase from Pyrococcus furiosus". Enzyme Research. 2011 134893. doi:10.4061/2011/134893. PMC 3092513
3-dehydroquinate_synthase
acid The enzyme was characterised in the thermophilic bacteria, Pyrococcus horikoshii, and the product 2-(α-D-mannosyl)-D-glyceric acid (mannosylglycerate)
Mannosyl-3-phosphoglycerate phosphatase
Mannosyl-3-phosphoglycerate_phosphatase
Class of enzymes
enzyme is: Archaea, Bacteria. The enzyme, characterized from the archaeon Pyrococcus furiosus, the Gram-positive bacterium Peptoclostridium acidaminophilum
Translocase
Indian chemist
the Tungsten Sites of Inactive and Active Forms of Hyperthermophilic Pyrococcus furiosus Aldehyde Ferredoxin Oxidoreductase". Journal of the American
Sabyasachi_Sarkar
Japanese chemical company
Kosugi Y, Ishikawa K (January 2002). "Hyperthermostable endoglucanase from Pyrococcus horikoshii". Appl. Environ. Microbiol. 68 (1): 430–433. Bibcode:2002ApEnM
Rakuto_Kasei
Class of enzymes
"2-keto acid oxidoreductases from Pyrococcus furiosus and Thennococcus litoralis". 2-keto acid oxidoreductases from Pyrococcus furiosus and Thermococcus litoralis
3-methyl-2-oxobutanoate dehydrogenase (ferredoxin)
3-methyl-2-oxobutanoate_dehydrogenase_(ferredoxin)
Class of enzymes
Schut GJ, Menon AL, Adams MW (2001). "2-keto acid oxidoreductases from Pyrococcus furiosus and Thennococcus litoralis". Hyperthermophilic enzymes Part B
2-oxoglutarate_synthase
Topics referred to by the same term
family of enzymes includes: MRE11A in humans The Mre11 in Pyrococcus furiosus - see Pyrococcus furiosus § Mre11 This disambiguation page lists articles
Mre11
Iron-carrying protein
"Silver ion incorporation and nanoparticle formation inside the cavity of Pyrococcus furiosus ferritin: structural and size-distribution analyses". Journal
Ferritin
Ability of an enzyme to catalyse multiple metabolic reactions simultaneously
chymotrypsin, and the bifunctional isopropylmalate isomerase/homoaconitase from Pyrococcus horikoshii have revealed that active site loop mobility contributes substantially
Enzyme_promiscuity
Pyrococcus furiosus, one of the few modern organisms in which the incorporation of tungsten is still essential
Evolution of metal ions in biological systems
Evolution_of_metal_ions_in_biological_systems
Family of proteins that form microfilaments
crystallographs (PDB: 2ZDI) of the prefoldin proteins found in the archaean Pyrococcus horikoshii. The six supersecondary structures are present in a coiled
Actin
Sequence in a genome
Cdc6/Orc1 at the DNA replication origin in the hyperthermophilic archaeon Pyrococcus furiosus". Extremophiles. 14 (1): 21–31. doi:10.1007/s00792-009-0284-9
Origin_of_replication
Greek-American bioscientist (born 1963)
eubacterial transcriptional activator Lrp is present in the Archaeon Pyrococcus furiosus". Trends in Biochemistry. 20 (4): 140–141. doi:10.1016/s0968-0004(00)88988-4
Nikos_Kyrpides
solved. Among those are transcription factor B (TFB) from the archaeon Pyrococcus woesei which presents an inverted orientation and a TFIIB from the parasite
B_recognition_element
University in Bavaria, Germany
Department of Microbiology between 1980 and 2002. Among his discoveries were Pyrococcus furiosus in 1986, Aquifex aeolicus, Aquifex pyrophilus, and Nanoarchaeum
University_of_Regensburg
Modified genetic code
Methanococcus jannaschii Yes No No tRNALys–LysRS Pyrococcus horikoshii Yes No No tRNAGlu–GluRS Pyrococcus horikoshii Yes No No tRNALeu–LeuRS tRNA: mutant
Expanded_genetic_code
Class of enzymes
acid The two substrates of this enzyme characterised from Pyrococcus horikoshii are 3-phospho-D-glyceric acid and GDP-mannose. Its products
Mannosyl-3-phosphoglycerate synthase
Mannosyl-3-phosphoglycerate_synthase
Group of chemical elements
identified in an analogous role in enzymes from some archaea, such as Pyrococcus furiosus. In contrast, and unusually for a first-row d-block transition
Group_6_element
Mayer C, Sauter C, Weeks S, Suck D (2003). "Crystal Structures of the Pyrococcus abyssi Sm Core and Its Complex with RNA". J. Biol. Chem. 278 (2): 1239–47
List_of_RNAs
Part of the Fobos-Grunt mission (2011)
in the Martian atmosphere. M. wolfeii is a methane-producing organism. Pyrococcus furiosus P. furiosus thrives at about 100 °C, it was supposed to act as
Living Interplanetary Flight Experiment
Living_Interplanetary_Flight_Experiment
Family of transport proteins
bothHaemophilus influenzae and Bacillus subtilis. E. coli lacks such a homologue. Pyrococcus species also have at least one homologue each. Thus, members of the NhaC
NhaC_family
Enzyme
NAD(P)H:Rubredoxin oxidoreductase from the hyperthermophilic archaeon Pyrococcus furiosus". Journal of Bacteriology. 181 (17): 5530–3. doi:10.1128/JB.181
Rubredoxin—NAD(P)(+) reductase
Rubredoxin—NAD(P)(+)_reductase
ribose-5-phosphate isomerase D-Ribose-5-phosphate isomerase homotetramer, Pyrococcus horikoshii Identifiers EC no. 5.3.1.6 CAS no. 9023-83-0 Databases IntEnz
Ribose-5-phosphate_isomerase
Multiprotein complex
A full-length argonaute protein from the archaea species Pyrococcus furiosus.
RNA-induced_silencing_complex
Family of porters that belong to the CPA superfamily
homologous to proteins encoded within the genomes of archaea, such as Pyrococcus abyssi (Cohen et al., 2003). Consequently, NaT-DC family members may be
Sodium-transporting carboxylic acid decarboxylase
Sodium-transporting_carboxylic_acid_decarboxylase
of eukaryotic methylation guide small nucleolar RNAs: lessons from the Pyrococcus genomes". Journal of Molecular Biology. 297 (4): 895–906. doi:10.1006/jmbi
List of sequenced archaeal genomes
List_of_sequenced_archaeal_genomes
Family of archaea
W; Holz I; Klenk HP; Trent J; Wunderl S; Janekovic D; et al. (1987). "Pyrococcus woesei, sp. nov., an ultra-thermophilic marine Archaebacterium, representing
Thermococcaceae
Seamount in Polynesia, southeast of the Austral Islands
Hyperthermophilic bacteria have been found on Macdonald, including Archaeoglobus, Pyrococcus, Pyrodictium and Thermococcus as well as previously undescribed species
Macdonald_seamount
Enzymes that break down glycine
crystal structure of a component of glycine cleavage system: t-protein from pyrococcus horikoshii ot3 at 1.5 a resolution Identifiers Symbol GCV_T Pfam PF01571
Glycine_cleavage_system
PYROCOCCUS
PYROCOCCUS
PYROCOCCUS
PYROCOCCUS
Boy/Male
Hindu, Indian
Wise
Boy/Male
Tamil
Having many branches, Another name of Lord Shiva
Boy/Male
Tamil
Entertainment, Faithful
Boy/Male
Tamil
Dry, Hard
Girl/Female
Indian, Telugu
Always Doer
Boy/Male
Indian
Type of Bird or Fragrance; One with Blue Body
Girl/Female
Tamil
Suhayla | ஸà¯à®¹à®¯à¯à®²à®¾
Smooth, Soft ground, Fluent, Flowing style
Surname or Lastname
English, Scottish, Danish, Norwegian, Swedish, German, and Jewish (Ashkenazic)
English, Scottish, Danish, Norwegian, Swedish, German, and Jewish (Ashkenazic) : topographic name for someone who lived on patch of sandy soil, from the vocabulary word sand. As a Swedish or Jewish name it was often purely ornamental.Dutch and Belgian : reduced form of Van den Sand(e), Van den Zande, a habitational name from places such as Zande in West Flanders or various minor places named with zand ‘sand’.English and Scottish : from a short form of Alexander.French : from a Germanic personal name, Sando.
Girl/Female
German, Turkish
Shining Like a Moon
Girl/Female
English
beverage brandy used as a given name.
PYROCOCCUS
PYROCOCCUS
PYROCOCCUS
PYROCOCCUS
PYROCOCCUS