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Database of nematode genomics
WormBase is an online biological database about the biology and genome of the nematode model organism Caenorhabditis elegans and contains information about
WormBase
Free-living species of nematode
in the field curate a dedicated online database and WormBase is that for C. elegans. The WormBase attempts to collate all published information on C.
Caenorhabditis_elegans
Large type of parasitic organism
sequenced in recent years and are available through the ParaSite sub-portal of WormBase. Parasitic worms have been used as a medical treatment for various diseases
Parasitic_worm
American biologist
Paul W. Sternberg is an American biologist. He does research for WormBase on C. elegans, a model organism. Paul Sternberg grew up in Long Island, New York
Paul_W._Sternberg
Sequence of DNA that determines traits in an organism
Human Genome Project. Retrieved 26 April 2015. "WS227 Release Letter". WormBase. 10 August 2011. Retrieved 19 November 2013.{{cite web}}: CS1 maint: deprecated
Gene
Largest known protein in human muscles
from the original on 2019-09-04. Retrieved 2019-09-04. "ttn-1 (gene)". WormBase: Nematode Information Resource. Archived from the original on 27 March
Titin
American bioinformatician
resources, including the Generic Model Organism Database project, BioPerl, WormBase, and the Reactome pathway database. His work has also contributed to large
Lincoln_Stein
Genus of roundworms
"Wormbase". Retrieved 4 September 2015. "GSC: Caenorhabditis remanei". Archived from the original on 13 March 2007. Retrieved 28 April 2007. "Wormbase"
Caenorhabditis
Genus of flatworms
Uptodate Parasites in Human A putative new species of Taenia described in Eurasian lynx from Finland The Taenia genome sequences in WormBase ParaSite
Taenia_(flatworm)
species (Plasmodium falciparum and others) Wormbase: genome of the model organism Caenorhabditis elegans and WormBase ParaSite for parasitic species Xenbase:
List_of_biological_databases
Scientific naming of genes
Glance Horvitz, Brenner, Hodgkin, and Herman (1979)[permanent dead link] WormBase Honey bee (Apis mellifera) Beebase Animals - Vertebrates Human (Homo sapiens)
Gene_nomenclature
Species of flatworm
the small intestine (Video) - endoscopy of the small intestine in 40-year-old woman infected with T. saginata Taenia Genome database WormBase ParaSite
Taenia_saginata
Database of protein sequences and functional information
isoforms, UniProtKB/TrEMBL Vertebrate and Genome Annotation Database (VEGA) WormBase The UniProt Reference Clusters (UniRef) consist of three databases of clustered
UniProt
Former Director General of MI5 (born 1948)
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Eliza_Manningham-Buller
International scientific research project (1990–2003)
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Human_Genome_Project
Chemical database of bioactive molecules also having drug-like properties
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
ChEMBL
British genomics research institute
for animal genes WormBase, a database on the biology and sequence of the model organism C. elegans and other related Nematodes. WormBase ParaSite, a database
Wellcome_Sanger_Institute
Protein
disputed: although most sources place it as NR1K1, manual annotation at WormBase considers it a member of NR2A. There used to be a group 2D for which the
Nuclear_receptor
Species of fluke
vetpar.2008.04.011. PMID 18511199. "Fasciola hepatica - WormBase ParaSite". parasite.wormbase.org. Archived from the original on 22 March 2016. Retrieved
Fasciola_hepatica
Database of protein families
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Pfam
Field dedicated to organizing and structuring biomedical data
example: WormBase successfully solicits first-pass annotation from users and has integrated author curation with the micropublication process. WormBase also
Biocuration
Biology journal
protocols for C. elegans researchers. WormBook is the online text companion to WormBase, the C. elegans model organism database. Capitalizing on the World Wide
WormBook
Scientific project at the European Bioinformatics Institute
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Ensembl genome database project
Ensembl_genome_database_project
RNA that facilitates the addition of amino acids to a new protein
doi:10.1128/MMBR.00104-21. PMC 8579967. PMID 34756086. WormBase web site, http://www.wormbase.org Archived 2017-04-20 at the Wayback Machine, release
Transfer_RNA
Open-access scientific journal
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
ELife
Public-private organization for vaccine development
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Coalition for Epidemic Preparedness Innovations
Coalition_for_Epidemic_Preparedness_Innovations
Species of fluke
Wikimedia Commons Scholia has a topic profile for Schistosoma mansoni. Disease info at CDC Species profile at Animal Diversity Web Profile at WormBase
Schistosoma_mansoni
British healthcare research charity established in 1936
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Wellcome_Trust
Award
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Wellcome Trust Principal Research Fellowship
Wellcome_Trust_Principal_Research_Fellowship
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Wellcome Research Laboratories
Wellcome_Research_Laboratories
Ontology for annotation of sequences
Content Description Biological sequence ontology Contact Research center WormBase, FlyBase, the Mouse Genome Informatics group, and the Sanger Institute
Sequence_Ontology
British biologist and academic (1942–2018)
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
John_Sulston
Retrieved 2024-09-05. Mouse Genome Informatics Zebrafish Information Network WormBase database of nematode biology FlyBase International Mouse Phenotyping Consortium
The_Monarch_Initiative
Type of biological database
Baran J, Bieri T, Cabunoc A, Chan J, Chen WJ, et al. (January 2014). "WormBase 2014: new views of curated biology". Nucleic Acids Research. 42 (Database
Model_organism_database
Long-term biobank study of 500,000 people
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
UK_Biobank
British businessman (born 1962)
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Damon_Buffini
Scientific facility in Oxfordshire, England
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Diamond_Light_Source
Genome Institute The Institute for Genomic Research TIGR Rice Genome Browser ToxoDB TriAnnot BAC Viewer VectorBase wFleaBase WormBase XanthusBase Xenbase
Generic Model Organism Database
Generic_Model_Organism_Database
Overview article
of an Organism" Academic Press (October 1995) ISBN 0-12-240545-5 FlyBase Main Drosophila research database. WormBase Main C. elegans research database.
Animal testing on invertebrates
Animal_testing_on_invertebrates
features in multiple alignments. Example output: [14] [15] TIGR DAS Viewer [16] WormBase The WormBase genome Browser. Includes a DAS viewer named DASView
Distributed Annotation System/Clients
Distributed_Annotation_System/Clients
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Science_Learning_Centres
Form of pathological egg retention observed in nematodes
Worm Meeting "Bagging as a part of the C. elegans life cycle". (paper) - WormBase: Nematode Information Resource. (n.d.). Pickett, Christopher L.; Kornfeld
Worm_bagging
defective; glp, Germ Line Proliferation defective. sel-12 gene summary (WormBase) Diane Levitan, Iva Greenwald (September 1995). "Facilitation of lin-12-mediated
Sel-12
Scientific research campus in Hinxton, Cambridgeshire, England
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Wellcome_Genome_Campus
British psychologist
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Dorothy_V._M._Bishop
British haematologist
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Michael_Dexter
British businessman (born 1947)
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
William_Castell
Genome Database (SGD) SILVA STRING UCSC Genome Browser UniProt VEuPathDB WormBase ZFIN: The Zebrafish Information Network Cook, Chuck; Cochrane, Guy (2023-09-08)
Global_Biodata_Coalition
British epidemiologist
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Anne_Mandall_Johnson
Free, online database and bioinformatics resource
Database" in 1994. FlyBase Rat Genome Database Saccharomyces Genome Database WormBase Xenbase Zebrafish Information Network "MGI-MGI Current Funding Support"
Mouse_Genome_Informatics
Online database of non-coding RNA and other RNA elements
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Rfam
Species of worm
BioProject PRJEB30104, Data Source ENS Lyon, Taxonomy ID 2138241". wormbase.org. WormBase ParaSite. 18 April 2023. Retrieved 27 September 2023. Mochizuki
Mesorhabditis_belari
British computational biologist
Thierry-Mieg developed the genome database AceDB, which evolved into the WormBase web resource. Following this he played an important role in data collection
Richard_M._Durbin
Biological database
States and is partnered with the Saccharomyces Genome Database, FlyBase, WormBase, PomBase, and the Alliance of Genome Resources. The BioGRID is funded by
BioGRID
Australian medical researcher (1938–2026)
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Bridget_Ogilvie
Biomedical research centre in London
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Francis_Crick_Institute
British educational magazine
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Big_Picture_(magazine)
Field of biological research
KL, Bolt BJ, Cain S, Chan J, Chen WJ, Davis P, et al. (January 2016). "WormBase 2016: expanding to enable helminth genomic research". Nucleic Acids Research
Comparative_genomics
storage repository XNAT Central Database, Image collection, Data repository WormBase Database, Data repository, Data analysis service, Software resource Wired
Neuroscience Information Framework
Neuroscience_Information_Framework
German neurobiologist (born 1960)
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Tobias_Bonhoeffer
International research effort on genetic variation
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
1000_Genomes_Project
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Wellcome Trust Centre for Cell-Matrix Research
Wellcome_Trust_Centre_for_Cell-Matrix_Research
British medical researcher
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Jeremy_Farrar
Science collective
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Genome_Reference_Consortium
British biologist (born 1954)
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Bryan_Grenfell
English pharmacologist and physiologist (1875–1968)
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Henry_Hallett_Dale
Mayernik, Borgman and Van de Sompel (2009) europePMC McEntyre et al. (2011) WormBase Yook et al. (2012) DANS Enhanced Publication Project Farace, Frantzen,
Enhanced_publication
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Cancer_Genome_Project
Species of roundworm
ORHABDITIS_SPECIES_and_the_state_of_their_genome_projects at evolution.wormbase.org Kikuchi T., Tsai I., Berriman M., Sugimoto A. and Kanzaki N. Evolutionary
Caenorhabditis_inopinata
Laboratory of the University College London
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Wellcome Centre for Human Neuroimaging
Wellcome_Centre_for_Human_Neuroimaging
impatiens Two additional species were under analysis: Apis dorsata Apis florea Wormbase Flybase Xenbase BeeBase website - http://hymenopteragenome.org/beebase/
BeeBase
Protein
Biology. 5 (5): 224. doi:10.1186/gb-2004-5-5-224. PMC 416462. PMID 15128440. WormBase Protein Summary: Sir-2.1 http://mediwire.skyscape.com/main/Default.aspx
Sirtuin_1
UK-based population genetics project
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
People_of_the_British_Isles
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Wellcome_Photography_Prize
Anglo-American businessman (1853–1936)
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Henry_Wellcome
ISSN 1097-4172. PMC 5388352. PMID 27863243. "lite-1 (gene) - WormBase: Nematode Information Resource". wormbase.org. Retrieved 2020-05-05. Geggel, Laura (17 November
LITE-1
Gene
ISSN 0047-6374. PMID 6632998. S2CID 6870538. "age-1 (gene) - WormBase : Nematode Information Resource". wormbase.org. Retrieved 2021-11-29. Luo, Yuan (April 2004)
Age-1
British geneticist
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Allan_Bradley
Database of biological information
for the fission yeast Schizosaccharomyces pombe, FlyBase for Drosophila, WormBase for the nematodes Caenorhabditis elegans and Caenorhabditis briggsae, and
Biological_database
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Centre for Gene Regulation and Expression
Centre_for_Gene_Regulation_and_Expression
ontology (see WormBase) WBLS An ontology for the development of Caenorhabditis elegans. [13] C. elegans Gross Anatomy Ontology (see WormBase) WBBT An ontology
List of OBO Foundry ontologies
List_of_OBO_Foundry_ontologies
X-ray crystallographer
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
David Stuart (structural biologist)
David_Stuart_(structural_biologist)
Museum and library in London, England
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Wellcome_Collection
Biological database
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
DECIPHER
305.1437L. doi:10.1126/science.1102513. PMID 15284456. S2CID 2778088. WormBase entry for rde-1 gene Catalogs alleles, polymorphisms, and C. elegans strains
RDE-1
Species of fluke
of Canada Opisthorchis spp. – Pathogen Safety Data Sheet Genome info at WormBase Info at Encyclopedia of Life Taxonomy at UniProt DPDx Laboratory Identification
Opisthorchis_viverrini
British stem cell biologist (born 1960)
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Austin_Gerard_Smith
Genome database
Wheat Rust Genomic Improvement WormBase WormBase ParaSite Ensembl European Bioinformatics Institute BLAST BLAT WormBase VectorBase List of sequenced plant
Ensembl_Genomes
English medical scientist and immunologist
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Mark_Walport
Scientific study of roundworms
model species, initially for neural development, and then for genetics. WormBase collates research on the species.[citation needed] Chen, Z. X., Chen, S
Nematology
W., Ph.D. Thesis, Univ. Cambridge (1960) "Antony Stretton (Person) - WormBase : Nematode Information Resource". "Untitled Document". Archived from the
Antony_Stretton
Chemical compound
Biology. 7 (1): 3–4. doi:10.1038/71190. PMID 10625413. S2CID 28185969. "Wormbase". Archived from the original on 2017-04-20. Retrieved 2022-01-15. The molecular
Emodepside
Species of roundworm
PMC 4617383. PMID 25730766. Taxonomy at UniProt A. ceylanicum genome at WormBase A. ceylanicum genome at ParaSite Nemtode.net The Genome Institute The Genome
Ancylostoma_ceylanicum
Model organism database on zebrafish
Genomics and Integrative Biology Zebrafish GenomeWiki Beta Preview maintained at the Institute of Genomics and Integrative Biology Wormbase Flybase Xenbase
Zebrafish_Information_Network
Species of flatworm
available through the WormBase ParaSite website. List of parasites (human) "Spirometra erinaceieuropaei - WormBase ParaSite". parasite.wormbase.org. Retrieved
Spirometra_erinaceieuropaei
Species of roundworm
that it is basal in the 'Elegans' supergroup with C. inopinata. List of Caenorhabditis species (including Caenorhabditis sp. 35) at wormbase.org v t e
Caenorhabditis_sp._35
Research centre
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Cambridge_Stem_Cell_Institute
British businessman (1934 – 2018)
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Roger_Gibbs
Protein-coding gene in humans
Dpy-19-like 2 (C. elegans)". "dumpy (phenotype)". wormbase.org. Retrieved 7 February 2023. "dpy-19 (gene)". wormbase.org. Retrieved 7 February 2023. "dpy-19".
DPY19L2
UK Biobank Wellcome Collection Wellcome Genome Campus Wellcome Library WormBase Board of governors Eliza Manningham-Buller Michael Ferguson Tobias Bonhoeffer
Wellcome Trust Centre for the History of Medicine
Wellcome_Trust_Centre_for_the_History_of_Medicine
WORMBASE
WORMBASE
WORMBASE
WORMBASE
Girl/Female
Arabic, Muslim
Beautiful; Good Looking
Boy/Male
Indian, Telugu
Goddess of Grains
Girl/Female
Hindu, Indian, Tamil
Goddess
Girl/Female
Indian, Parsi
Rain
Girl/Female
Greek American
Bond.
Boy/Male
Arabic
Joy; Gladness; Delight
Boy/Male
Arabic
Servant of the Source of Goodness
Girl/Female
Arabic, Muslim
Benevolent; Charitable; Love
Boy/Male
Arabic
Twilight of the Morning
Boy/Male
Tamil
Bhoomi ko dharan karne wala
WORMBASE
WORMBASE
WORMBASE
WORMBASE
WORMBASE