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Search references for PHRED. Phrases containing PHRED
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Measurement in DNA sequencing
A Phred quality score is a measure of the quality of the identification of the nucleobases generated by automated DNA sequencing. It was originally developed
Phred_quality_score
American children's television series
Phred on Your Head Show is an American children's television series produced for Noggin, a cable channel co-founded by MTV Networks and Sesame Workshop
Phred_on_Your_Head_Show
Phred (Phil's Read Editor) is a computer program for base calling, that is to say, identifying a nucleobase sequence from fluorescence "trace" data generated
Phred_(software)
Topics referred to by the same term
Phred may refer to: Phred (software), a computer program used in molecular biology Phred quality score, a term used in molecular biology Phred (Doonesbury)
Phred
2001 American TV series or program
The URL with Phred Show is an American children's television series produced for the Noggin channel. It is a spin-off series to Phred on Your Head Show
The_URL_with_Phred_Show
marijuana farm in Colorado with his uncle Zonker. Nguyen van Phred (February 16, 1972) – "Phred" for short. The Viet Cong "terrorist" who became friends with
List_of_Doonesbury_characters
File format for sequences and quality scores
to the Phred [i.e., Sanger] scoring scheme, encoded as an ASCII character by adding 64 to the Phred value. A Phred score of a base is: Q phred = − 10
FASTQ_format
American entertainment brand
imaginations. Noggin's first original program was Phred on Your Head Show, which featured an animated host named Phred. A second original series, A Walk in Your
Noggin_(brand)
American voice actor
Bone Hoyt 'n Andy's Sports Bender - Hoyt Phred on Your Head Show - Phred, Big Voice The URL with Phred Show - Phred, Big Voice PB&J Otter - Redolfo The World
Doug_Preis
File format for gene sequences
as the quality string in the Sanger FASTQ format). A base quality is the phred-scaled base error probability which equals −10 log10 Pr{base is wrong}.
SAM_(file_format)
– via The Futon Critic. Moss, Linda (July 18, 1999). "Preview May Help Phred Escape Pluto". Multichannel News. Retrieved July 21, 2021. "Noggin to Debut
List of programs broadcast by Nickelodeon
List_of_programs_broadcast_by_Nickelodeon
Hong Kong-British multinational conglomerate
& Food Chain". Swire. Retrieved 23 March 2023. Dvorak, Joanne Chiu And Phred (17 August 2014). "Swire Pacific Grooms Talent for the Long Term". Wall
Swire
2018 international rescue mission in Thailand
Archived from the original on 6 July 2018. Retrieved 6 July 2018. Dvorak, Phred; Watts, Jake Maxwell (11 July 2018). "The Thai Cave Rescue, Before Its Triumph
Tham_Luang_cave_rescue
Japanese multinational electronics corporation
2015. "Partners". www3.wipo.int. Retrieved September 19, 2022. Dvorak, Phred (February 12, 2022). "How One of the World's Biggest Carbon Emitters Got
Panasonic
American television producer and executive
Year Title Credit(s) Ref. 2001–2002 The URL with Phred Show Executive producer
Tom_Ascheim
Japanese investment holding company
sell-down". Reuters. Retrieved 26 January 2021. Narioka, Kosaku; Dvorak, Phred (18 September 2020). "SoftBank Sells Brightstar, Carrying On Its Divestiture
SoftBank_Group
out on special occasions in Philadelphia, such as games on Mother's Day. Phred is a secondary mascot for the Philadelphia Phillies. He is a furry, green
List of Major League Baseball mascots
List_of_Major_League_Baseball_mascots
Video game console by Nintendo
from the original on August 22, 2022. Retrieved August 22, 2022. Dvorak, Phred (November 5, 2003). "Nintendo's GameCube Sales Surge in U.S. After Price
GameCube
and Sesame Workshop. Both companies co-own the copyright. The URL with Phred Show was a regular part of Noggin's daytime block from July 2001 until March
List of programs broadcast by Noggin
List_of_programs_broadcast_by_Noggin
1981 video game
the alien fleet, including Firebombers, Yllabian Space Guppies, Dynamos, Phreds, Big Reds, Munchies and Space Hums. The Defender ship is now equipped with
Stargate_(1981_video_game)
Performance metric for lossless compression
(even if better than positive). Benchmark Coding theory Information theory Phred quality score Perry, Tekla (July 28, 2014). "A Fictional Compression Metric
Weissman_score
Japanese e-commerce and technology company
Stephanie Strom, "Online Overseas", The New York Times, June 7, 2000. Phred Dvorak, "Japan's Highly Popular Rakuten Plans IPO Despite Shaky Market"
Rakuten
Phrap is a widely used program for DNA sequence assembly. It is part of the Phred-Phrap-Consed package. Phrap was originally developed by Prof. Phil Green
Phrap
through a nanopore. One computer program for accomplishing this job is Phred, which was a widely used base calling software program by both academic
Base_calling
Television network animation department
February 25, 2022. Kilmer, David. "DMA, Possible Worlds and MTV Animation put Phred on your head". Animation World Network. Archived from the original on March
MTV_Animation
Japanese video game company
Archived from the original on May 17, 2020. Retrieved May 7, 2020. Dvorak, Phred (May 19, 2004). "Sammy to Buy Sega for $1.8 Billion". The Wall Street Journal
Sega
Method of DNA sequencing developed in 1977
of sequencing traces after 700–900 bases. Base calling software such as Phred typically provides an estimate of quality to aid in trimming of low-quality
Sanger_sequencing
Fictional character
his discharge he visited Phred for Christmas in his home village of Quảng Trị during an intense battle there . He ran into Phred, now a venture capitalist
B._D._(Doonesbury)
Educational television show
2002. Segments from the series were also included as part of Noggin's Phred on Your Head Show. The show focuses on up-close encounters with animals
Wild_Side_Show
American food delivery company
kitchen debut". San Francisco Chronicle. Retrieved June 2, 2026. Dvorak, Phred (February 8, 2021). "SoftBank Turns $11 Billion Profit, Helped by DoorDash"
DoorDash
LGBTQ film festival in Hawaii, USA
It (2019) Phred Love Award - Sandy Livingston; Director of Dungeons & Drag Queens: The Quest for the Golden Wig of Enlightenment (2019) Phred Love Award
Honolulu Rainbow Film Festival
Honolulu_Rainbow_Film_Festival
Political ideology advocating traditional values and power structures
Partiti politici in Italia. Il Mulino, Bologna. p. 58. Inada, Miho; Dvorak, Phred. "Same-Sex Marriage in Japan: A Long Way Away?" Archived 16 June 2016 at
Social_conservatism
1999 American TV series or program
which premiered on October 25, 1999, as part of Noggin's variety series Phred on Your Head Show. The first half-hour episode premiered on April 30, 2000
A_Walk_in_Your_Shoes
Japanese political party
Daily Telegraph. Archived from the original on 2 September 2025. Dvorak, Phred (22 July 2013). "Japan Communists Celebrate a Little Victory". The Wall
Japanese_Communist_Party
International scientific research project (1990–2003)
Nicholas (23 March 1999). "Who'll Sequence Human Genome First? It's Up to Phred". New York Times. Roach JC, Boysen C, Wang K, Hood L (March 1995). "Pairwise
Human_Genome_Project
Mascot of the Philadelphia Phillies
occasionally appears on-field with the Phanatic. He also has a younger cousin Phred, and a girlfriend Phiona who are rarely seen. According to the Phanatic's
Phillie_Phanatic
Conversion of energy from sunlight into electricity
News. 3 October 2025. Retrieved 4 October 2025. Blunt, Katherine; Dvorak, Phred (9 August 2022). "WSJ News Exclusive | U.S. Solar Shipments Are Hit by Import
Solar_power
American retired actress (born 1945)
Bracken's World Katy Episode: "One, Two, Three... Cry" 1970 The Student Nurses Phred 1970 Night Chase Vico's wife TV movie 1971 Mission Impossible Doris Gordon
Karen_Carlson
Sopranos, Rosalinda, Family Guy, Hunting Venus, Maisy, SpongeBob SquarePants, Phred on Your Head Show, Tweenies, Futurama, Ed, Edd n Eddy, Making the Video
List_of_years_in_television
Photographer and aquarist
20-inch large format camera, were exhibited on 4 × 1.5 meter panels. Dvorak, Phred (December 6, 2012). "The Sage of Aquariums". The Wall Street Journal. Archived
Takashi_Amano
1997 film by Mark Griffiths
Courtney Gains as Church Adam Gifford as Sergeant Blakely Mon Confiado as Phred Spanky Manikan as General Nguy Cris Daluz as Dr. Liu James Karen as TV Reporter
Behind Enemy Lines (1997 film)
Behind_Enemy_Lines_(1997_film)
American computational biologist (born 1950)
Bioengineering, mentoring more than 40 graduate students and post-docs. Phred – Green and Brent Ewing developed the first base-calling algorithm with
Phillip Greene (computational scientist)
Phillip_Greene_(computational_scientist)
Eight disciplines of team-oriented problem solving method
Structured Problem Solving: A Guide to Creating High Quality 8D Reports, PHRED Solutions, Second Edition ISBN 978-0979055317 Society of Manufacturing Engineers:
Eight disciplines problem solving
Eight_disciplines_problem_solving
Retrieved 2022-11-09. Laurie Rambaud (2006), 8D Structured Problem Solving: A Guide to Creating High Quality 8D Reports, PHRED Solutions, ISBN 0-9790553-0-X
Remedial_action
American strategy consulting firm
Archived from the original on 2011-10-28. Retrieved 2011-11-01. Dvorak, Phred (23 April 2009). "Booz to Buy Katzenbach Partners". The Wall Street Journal
Strategy&
Fugitive, businessman, and former automotive executive (born 1954)
Merger". The Wall Street Journal. 23 February 2017. McLain, Sean; Dvorak, Phred; Schechner, Sam; Kowsmann, Patricia (16 December 2018). "The Fall of the
Carlos_Ghosn
in 2002. Phred base calling Ewing, B; Hillier, L; Wendl, MC; Green, P (March 1998). "Base-calling of automated sequencer traces using phred. I. Accuracy
Philip_Palmer_Green
thresholds, cut reads to a specific length, converts quality scores to Phred-33/64. Recent sequencing technologies normally require DNA samples to be
List of RNA-Seq bioinformatics tools
List_of_RNA-Seq_bioinformatics_tools
Political party in Japan
representing and advising victims of sexual harassment. Inada, Miho; Dvorak, Phred. "Same-Sex Marriage in Japan: A Long Way Away?" Archived 2016-06-16 at the
Social Democratic Party (Japan)
Social_Democratic_Party_(Japan)
American designer
Toyo Carp 1995-present Jaxson de Ville Jacksonville Jaguars 1996-present G-Whiz Washington Wizards 1997-present Phred Philadelphia Phillies 2000-present
Bonnie_Erickson
Canadian animation studio
Specialties include animation, branding and design. Birdgirl (season 2) Phred on Your Head Show Dirty Singles A Sweet Story Sir Bit All Terrain Brain
Global_Mechanic
American renewable energy company
Easier Than It Seems". Wired. ISSN 1059-1028. Retrieved 2024-08-29. Dvorak, Phred (29 July 2024). "The Rush to Shore Up the Power Grid Against Hurricanes
Nextpower
1987 American TV series or program
episodes were leased by the Noggin network. Mathnet segments also aired on Phred on Your Head Show (one of Noggin's original programs). A Mathnet comic briefly
Mathnet
Australian multinational mining and metals company
"BHP withdraws Potash bid". Globe & Mail. Retrieved 26 July 2018. Dvorak, Phred; Chon, Gina (15 November 2010). "BHP Abandons Pursuit of Potash Corp". Wall
BHP
Method of species identification using a short section of DNA
a quality file with quality scores (PHRED scores) associated with each nucleotide of each DNA sequence. The PHRED scores indicate the probability with
DNA_barcoding
American mathematician and biomedical engineer
matching problems in probability, theoretical fluid mechanics, and co-wrote Phred. He was a scientist on the Human Genome Project and has done bioinformatics
Michael_Christopher_Wendl
Hydrogen produced by renewable energy
from the original on 12 November 2020. Retrieved 18 June 2021. Journal, Phred Dvorak | Photographs by Go Takayama for The Wall Street (13 June 2021).
Green_hydrogen
Japanese bank holding and financial services company
Archived from the original on 15 April 2015. Retrieved 9 April 2015. Dvorak, Phred (16 June 2000). "Asahi Exits Three-Way Bank Deal, Leaving Sanwa, Tokai to
MUFG
Process of determining the nucleic acid sequence
Phil Green and Brent Ewing of the University of Washington described their phred quality score for sequencer data analysis, a landmark analysis technique
DNA_sequencing
US nonprofit organization
Winkelman was originally introduced to painting at Hospitality House. Dvorak, Phred (May 30, 2009). "On the Street and On Facebook: The Homeless Stay Wired"
Hospitality_House
Top 50 Fastest Growing Companies, by the East Bay Business Times. Dvorak, Phred (26 July 2007). "Do-It-Yourself Consulting: CEOs Gather to Swap Tips". The
RW3_Technologies
Three largest car manufacturers of a country
Manufacturers". Archived from the original on January 29, 2019. Dvorak, Phred (November 21, 2013). "Japan's Big Three Car Makers Show Different Corporate
Big Three (automobile manufacturers)
Big_Three_(automobile_manufacturers)
Political philosophy
2020.{{cite web}}: CS1 maint: deprecated archival service (link) Barnet, Phred (14 April 2011). "The Non-Aggression Principle". Americanly Yours. Archived
Right-libertarianism
sequence logos, translation ABI, DNA Multi-Seq, FASTA, GCG Pileup, GenBank, Phred Proprietary, commercial, academic licenses available No Mac OS, Windows
List of alignment visualization software
List_of_alignment_visualization_software
Phil of the Future The Phil Silvers Show Phyllis Phineas and Ferb Phoenix Phred on Your Head Show Picket Fences Pickler & Ben Pie in the Sky (British) Piers
List of television programs: P
List_of_television_programs:_P
American company
firm WeFix". TechRadar. Retrieved 2020-07-31. Narioka, Kosaku; Dvorak, Phred (2020-09-18). "SoftBank Sells Brightstar, Carrying On Its Divestiture Spree"
Likewize
exchange protein and nucleic acid structures PHD – Phred output, from the base-calling software Phred PLN – Protein Line Notation used in proteax software
List_of_file_formats
Industrial production of molecular hydrogen
Review (2). National Renewable Energy Laboratory: 2–9. April 2004. Dvorak, Phred, "WSJ News Exclusive: Green Hydrogen Gets a Boost in the U.S. With $4 Billion
Hydrogen_production
Japanese holding company of Resona Group
from the original on 20 February 2002. Retrieved 17 April 2015. Dvorak, Phred (16 June 2000). "Asahi Exits Three-Way Bank Deal, Leaving Sanwa, Tokai to
Resona_Holdings
Oil pipeline in North America
Canadian oil sands pipeline". Reuters. Retrieved July 27, 2010. Dvorak, Phred; Welsch, Edward (July 8, 2010). "Oil Sands Push Tests US-Canada Ties". The
Keystone_Pipeline
Discipline of figure skating that draws from ballroom dancing
1 December 2024. Retrieved 19 August 2025. Fowler, Geoffrey A.; Dvorak, Phred (23 January 2022). "Canada's Virtue, Moir Win Ice Dance Gold". The Wall
Ice_dance
1970 American film
a cult film. Four young women share a house as they study to be nurses—Phred falls for a sexy doctor, Jim, despite accidentally sleeping with Jim's roommate
The_Student_Nurses
Series of entertainment robotic dogs
Robotic Dog?". The Skinny. Retrieved 9 January 2016. YUKARI IWATANI KANE; PHRED DVORAK (March 3, 2007). "Caught between two worlds, the Sony chief tightens
AIBO
(2010) U to U Urawa no Usagi-chan Urban Vermin Urusei Yatsura The URL with Phred Show Utopia (British TV series), a 2013 British drama series Utopia (Australian
List of television programs: U–V–W
List_of_television_programs:_U–V–W
Japanese electric utility holding company
New York Times, March 19, 2011. Retrieved 2011-03-21. Shirouzu, Norihiko, Phred Dvorak, Yuka Hayashi and Andrew Morse, "Bid to 'Protect Assets' Slowed Reactor
Tokyo_Electric_Power_Company
Former Japanese bank
Retrieved April 9, 2015. "The Tokai Bank, Ltd". Encyclopedia.com. Dvorak, Phred (June 16, 2000). "Asahi Exits Three-Way Bank Deal, Leaving Sanwa, Tokai
Tokai_Bank
Sailing facility in Berkeley, California
Retrieved 2009-11-25. "Travel". "Unknown".[permanent dead link] Dvorak, Phred (4 March 2008). "Board of Advisers Can Help Steer Small Firms to Right Tack
OCSC_Sailing
Service helping employees find a new job
(2002). "From Fired to Hired". Journal of Accountancy. 193 (6): 43. Dvorak, Phred; Lublin, Joann S (August 20, 2009). "Outplacement Firms Struggle to Do Job"
Outplacement
Core concept in libertarianism
32 (2): 62–90. doi:10.1017/S026505251600011X. Retrieved 14 June 2025. Phred Barnet. "The Non-Aggression Principle (Americanly Yours, April 14, 2011)"
Non-aggression_principle
Title Years Network Co-production with Notes Phred on Your Head Show 1999–2000 Noggin MTV Animation and Possible Worlds A Walk in Your Shoes 1999–2005
List of Paramount Skydance television programs
List_of_Paramount_Skydance_television_programs
Kong". Reuters. Archived from the original on 7 December 2011. Dvorak, Phred; Osawa, Juro (23 November 2011). "Olympus Deals Reveal More Firms of Obscure
List of people involved in the Olympus scandal
List_of_people_involved_in_the_Olympus_scandal
Method of DNA sequence reconstruction
sequence assemblers have some algorithms built in for quality control, such as Phred. However, such measures do not assess assembly completeness in terms of
Sequence_assembly
Type of flute
the Tibetan transverse flute with six or seven finger holes is called phred-gling or ti-gling and is only used in light music. Other flutes called lingbu
Limbe_(instrument)
File format for sequence data
position (depth of coverage) Bases at that position from aligned reads Phred Quality of those bases, represented in ASCII with -33 offset (OPTIONAL)
Pileup_format
File format for genomic variation data
genotype quality GT Genotype HQ Haplotype quality MQ RMS mapping quality PL Phred-scaled genotype likelihoods rounded to the closest integer PQ Phasing quality
Variant_Call_Format
Canadian think tank
September 22, 2018, at the Wayback Machine, "Emerging from the Shadow", Phred Dvorak "What's next for Canada's economy?". The Economist. 1 March 2018
Macdonald–Laurier_Institute
Japanese politician (1928–2022)
news}}: CS1 maint: deprecated archival service (link) Mark Tannenbaum; Phred Dvorak (1 February 1998). "Bribery charges hit Japan's rescue plan". The
Hikaru_Matsunaga
US law creating the Troubled Asset Relief Program (TARP)
September 28, 2008. Amendment to HR 1424, Division A, Section 113. Dvorak, Phred and Lublin, Joann S. "Bailout's Bid to Limit Executive Pay Will Be Tough
Emergency Economic Stabilization Act of 2008
Emergency_Economic_Stabilization_Act_of_2008
2005 compilation album by Judee Sill
arranger, electric guitar, backing vocals Kevin Kelly – drums, backing vocals Phred Lender – programming, authoring Marc McClure – backing vocals, vocal arrangement
Dreams Come True (Judee Sill album)
Dreams_Come_True_(Judee_Sill_album)
various branches of DNA sequencing, as well as for having co-developed Phred, a widely used DNA trace analyzer. Her multidisciplinary approach integrates
Ladeana_Hillier
Traditional Percy the Park Keeper 1 13 United Kingdom 1999 ITV (CITV) Traditional Phred on Your Head Show 2 31 United States 1999–2001 Noggin Flash Los Pintín Argentina
List of animated television series of 1999
List_of_animated_television_series_of_1999
DNA sequence assembly software
different programs. The main components are: pregap4 – base calling with Phred, end clipping, and vector trimming trev – trace viewing and editing gap4
Staden_Package
American businessman
China Daily Europe. Retrieved December 28, 2020. Dvorak, Joanne Chiu And Phred (2014-08-17). "Swire Pacific Grooms Talent for the Long Term". Wall Street
John_Slosar
Chinese-American businessman
Favor". Wall Street Journal. ISSN 0099-9660. Retrieved 2022-03-05. Dvorak, Phred; Saito, Yasufumi (19 November 2017). "HNA: The Making of a Chinese Giant"
Tan_Xiangdong
Media term for staff of Fukushima Plant
FD and SDF has sprayed about 4050 tons of sea water by 24th) Dvorak, Phred (24 March 2011). "Behind Reactor Battle, a Legion of Grunts". The Wall Street
Fukushima_50
2026–present PBS Kids Phoebe & Jay Productions Canadian co-production TV-Y Flash Phred on Your Head Show 2 31 1999–2001 Noggin MTV Animation Possible Worlds TV-Y
List of American animated television series
List_of_American_animated_television_series
United Kingdom Canada 2001 ITV (CITV) Teletoon Stop Motion The URL with Phred Show 1 20 United States 2001–02 Noggin Flash What's with Andy? 3 78 Canada
List of animated television series of 2001
List_of_animated_television_series_of_2001
American diplomat (1894–1984)
Ellsworth Bunker." In a 1978 Doonesbury cartoon, a New York tailor fitting Phred with a very old-fashioned suit says "Ellsworth Bunker used to get everything
Ellsworth_Bunker
2015 studio album by Mark Ronson
harmonica (tracks 1, 11) Peter Cottonale – additional keyboards (tracks 1, 7) Phred Brown – additional keyboards (track 4) Geoff Zanelli – synth string (track
Uptown_Special
Filipino actor (born 1968)
Legacy Doorman 1997 Nasaan ang Puso? Urban Poor Attorney Behind Enemy Lines Phred T.G.I.S.: The Movie Rescuer Bubot, Kulang sa Panahon Andring Sa Kabilugan
Mon_Confiado
PHRED
PHRED
PHRED
PHRED
Boy/Male
British, English, Hindu, Indian, Polish
Bear
Boy/Male
Welsh Anglo Saxon
Leader. Lion-like.
Boy/Male
Arabic, Muslim
Page; Valet (Domestic) Servant; Full of Qualities
Surname or Lastname
English
English : unexplained.
Boy/Male
Hindu
Kamdev or cupid
Male
Greek
(Αντώνης) Contracted form of Greek Antonios, possibly ANTONIS means "invaluable."Â
Girl/Female
Biblical
The dowry of God.
Female
German
Pet form of German Ivonne, IVONETTE means "yew tree."
Male
African
a lord, a possessor.
Girl/Female
Indian
One who sees
PHRED
PHRED
PHRED
PHRED
PHRED